PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020699753.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 156aa MW: 17995.6 Da PI: 10.233 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 174.1 | 4e-54 | 8 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPtdeel+ +yL++++ +++l++ ++i+evdiyk++PwdLp+k+ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+++s XP_020699753.1 8 MPPGFRFHPTDEELILHYLRNRALASPLPV-SIIAEVDIYKFDPWDLPAKAVFGEREWYFFSPRDRKYPNGVRPNRAAASGYWKATGTDKPIIS- 100 79****************************.89***************8777899***************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e++g+kk Lvfy+gr pkg ktdW+mheyrl XP_020699753.1 101 RNENIGVKKALVFYTGRPPKGLKTDWIMHEYRL 133 8899***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MTNPATQMPP GFRFHPTDEE LILHYLRNRA LASPLPVSII AEVDIYKFDP WDLPAKAVFG 60 EREWYFFSPR DRKYPNGVRP NRAAASGYWK ATGTDKPIIS RNENIGVKKA LVFYTGRPPK 120 GLKTDWIMHE YRLADSPNNK SYKPIRLGDH SMRVSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.1 | 4e-78 | NAC family protein |