PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020698973.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 311aa    MW: 34545.6 Da    PI: 7.9004
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020698973.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.51.6e-29163222159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ ++++ pr+Y+rC++a +Cpvkkkv+rs +d ++++ tYegeHnh+
  XP_020698973.1 163 VKDGYQWRKYGQKVTRDNPSPRAYFRCSFApSCPVKKKVQRSVDDLSILVATYEGEHNHR 222
                     58***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MDPSPQLGCS TVNLDLSVGP TNFLIEAPIC SRTLATNPIQ IRRNSPSREE AEDMKLKVQK  60
LSEENRKLNE KLSAMSVNYS NLQNQLLDLM NSSPSEKGLT SSPSPTRKRK SISQESDENS  120
GFIPHVESMS SEDSYQRLRV DSKSSISKIC VKTDPSDRTT LVVKDGYQWR KYGQKVTRDN  180
PSPRAYFRCS FAPSCPVKKK VQRSVDDLSI LVATYEGEHN HRPPLQGETP SRASHGVSST  240
PNSAGQTVTV DLTDDRWHVN SDKVSTETTS VEFQKVMIEQ MAAALSKDPN FQTSLANAIS  300
ERILELPSSH N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106111TRKRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-66WRKY family protein