PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020698972.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 312aa    MW: 34673.7 Da    PI: 7.9004
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020698972.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.51.6e-29164223159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ ++++ pr+Y+rC++a +Cpvkkkv+rs +d ++++ tYegeHnh+
  XP_020698972.1 164 VKDGYQWRKYGQKVTRDNPSPRAYFRCSFApSCPVKKKVQRSVDDLSILVATYEGEHNHR 223
                     58***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MDPSPQLGCS TVNLDLSVGP TNFLIEAPIC SRTLATNPIQ IRRNSPSREE QAEDMKLKVQ  60
KLSEENRKLN EKLSAMSVNY SNLQNQLLDL MNSSPSEKGL TSSPSPTRKR KSISQESDEN  120
SGFIPHVESM SSEDSYQRLR VDSKSSISKI CVKTDPSDRT TLVVKDGYQW RKYGQKVTRD  180
NPSPRAYFRC SFAPSCPVKK KVQRSVDDLS ILVATYEGEH NHRPPLQGET PSRASHGVSS  240
TPNSAGQTVT VDLTDDRWHV NSDKVSTETT SVEFQKVMIE QMAAALSKDP NFQTSLANAI  300
SERILELPSS HN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107112TRKRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.13e-66WRKY family protein