PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020698741.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 273aa MW: 31048 Da PI: 9.3922 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.5 | 4.7e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed ll +++ +G g+W++ +++ g+ R++k+c++rw +yl XP_020698741.1 14 RGPWTAREDALLTSYIQNHGEGNWRSLPKRAGLLRCGKSCRLRWMNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 46.8 | 6.8e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +eE++l+++++ +lG++ W++Ia +++ gRt++++k++w+++l XP_020698741.1 67 RGNIGPEEEDLIIRLHCLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 112 677889****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence |
MGRAPCCSKV GLHRGPWTAR EDALLTSYIQ NHGEGNWRSL PKRAGLLRCG KSCRLRWMNY 60 LRPDIKRGNI GPEEEDLIIR LHCLLGNRWS LIAGRLPGRT DNEIKNYWNS HLSKKLKNQG 120 FVVREGTPRP KRSAAPNSDN KRKNNNNVNN NSKFAKIMQG NDAPESTKIY APKPTRFKPK 180 WLGMEKSESM TGDGEKGTSE ASSATDNADL VSWSQVDHVR EFDQTVGFLN ATHWDLASDF 240 SMQDESLERL YNEYSQLLQF EVDVNQLAEP LML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47460.1 | 1e-64 | MYB family protein |