PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020698594.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 227aa MW: 26163.6 Da PI: 5.9778 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.8 | 1.1e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+ +++ +G g+W++ ++ g+ R++k+c++rw +yl XP_020698594.1 14 KGPWTPEEDHILISYIRTHGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 51.3 | 2.7e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++ ++ +++lG++ W++Ia++++ gRt++++k++w+++l XP_020698594.1 67 RGDFSKEEEDTIIYMHTMLGNR-WSAIAAKLP-GRTDNEIKNFWHTHL 112 899*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MVRAPCCEAM GLKKGPWTPE EDHILISYIR THGHGNWRAL PKQAGLLRCG KSCRLRWTNY 60 LRPDVKRGDF SKEEEDTIIY MHTMLGNRWS AIAAKLPGRT DNEIKNFWHT HLKKRLNPNQ 120 VAKKSKPKVQ KKNKVEEQIS PGFVQNEPSF FEINTENDNV DVMQKCIDDY FKEYLPEIDE 180 LLWSEAFAVT GEEEESSIGE SFSQPSLSND DAISFWMNLL AESGNLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 2e-73 | MYB family protein |