PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020698593.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family MYB_related
Protein Properties Length: 314aa    MW: 34180.1 Da    PI: 6.6706
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020698593.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.92e-1291135347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+ l++ + ++lG+g+W+ I+r    +Rt+ q+ s+ qky
   XP_020698593.1  91 PWTEDEHRLFLLGLQKLGKGDWRGISRNYVITRTPTQVASHAQKY 135
                      8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MTRKCSHCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLSLFAGS AAGGSPADGP  60
EIAGAAGDGY ASEDFVQGSS SSCRERKRGV PWTEDEHRLF LLGLQKLGKG DWRGISRNYV  120
ITRTPTQVAS HAQKYFIRQT NASRRKRRTS LFDIVPDETI EPQFFPMNFQ EPETQAAAGS  180
STPANPLLEE ECESMDSNNY VEEETTAIRP EVSEPQCSHP IMYPAYFSPF FSLTLPRLGC  240
AEATVEEQVH EIVKPTPVHS KSPINVDELL GISKLSIGES GSEEATPSIS VNLLGGSSRH  300
SAFHANTTAY QKTA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-109MYB_related family protein