PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020697786.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GATA
Protein Properties Length: 271aa    MW: 30101.7 Da    PI: 7.9101
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020697786.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.71.9e-19191225135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+ kTp+WR gp g+ktLCnaCG+++++ +l
  XP_020697786.1 191 CTHCGVQKTPQWRAGPHGPKTLCNACGVRFKSGRL 225
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MNGLNETISS VEEAPVVEEF QVDDLLDLRG LPEPEKNEEE DDGDAKGVAF VSFEKESPPL  60
SGISLPEETD AADLEWLSRF VHDCHSEYQP AFASLKEETA CFPTKLPSPV DVWRLKKEAL  120
VPIKAKRSKR HRRTGAFWFI FSTFSVSSNT SSPSSSSSCC SSYKSQESYQ KKRGRKPNNS  180
AASGVSGDRQ CTHCGVQKTP QWRAGPHGPK TLCNACGVRF KSGRLLPEYR PACSPTFVDN  240
IHSNKHRKVM EMRRKNEGQL FSAAAQPVQS C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36240.11e-50GATA family protein