PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020697291.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 588aa MW: 64844.7 Da PI: 8.1652 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.4 | 3.4e-18 | 59 | 104 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g WT+eEde l +av+++ g++Wk+Ia+ ++ Rt+ qc +rwqk+ XP_020697291.1 59 KGGWTPEEDETLRRAVELHKGRSWKKIAESIP-DRTEVQCLHRWQKV 104 688*****************************.************96 PP | |||||||
2 | Myb_DNA-binding | 52.4 | 1.2e-16 | 111 | 157 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed+ ++++v+++G+ W+ Ia+ ++ gR +kqc++rw+++l XP_020697291.1 111 KGSWTPLEDDVIINLVAKYGPTKWSVIAKSLP-GRIGKQCRERWHNHL 157 799*****************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 52.1 | 1.5e-16 | 163 | 206 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE+ l +a+ ++G++ W+ Ia+ + gRt++++k++w++ XP_020697291.1 163 KDSWTLEEEIELMKAHIKHGNK-WAEIAKVIR-GRTDNSIKNHWNS 206 679*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 588 aa Download sequence |
MTTMKIKESC AENKQSITAS GSSLSEENYG FSRMSPAASY PATSTPSHRR TSGPIRRAKG 60 GWTPEEDETL RRAVELHKGR SWKKIAESIP DRTEVQCLHR WQKVINPELV KGSWTPLEDD 120 VIINLVAKYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPE IRKDSWTLEE EIELMKAHIK 180 HGNKWAEIAK VIRGRTDNSI KNHWNSSLRK KLDYYLRTGK LPPVQGTCMF NTAPDAGNLG 240 ARQLIYCLNG GLETDVKNVP ETSSNVSSSL RAKMADKHDS VNPLTASVSD SHHLRTGNLA 300 PVQRTGILSL NPWISSRDVV VGEADNSISG ECDAQVPEIV PVDEQDASDS GVKYCKCIGK 360 NSQNEEPSET TLCSVPSNVS FLCYKPPRLE DLAIDKWSQM SKCSSEQSIE SFLKDAARSF 420 TNTPSIIKRK EAITSLPSDI VTDTMQSNEI RVHDGCTPND GNVCSYTEGS RSSVSKFYSG 480 ACASNGALFT NEDDFNVSPP YRISCKRKAI FRSVEKQLDF TLAEGYSDGN AKDSSLAAKD 540 SSLAGNINSL SPNSTTVQAL SMQRRRLAEN PSGGNERDYS SITKMGVV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G09370.2 | 1e-124 | MYB family protein |