PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020697109.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ARR-B | ||||||||
Protein Properties | Length: 510aa MW: 57154.4 Da PI: 6.1346 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 85.2 | 6.5e-27 | 190 | 243 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+ W+peLH++F+++v+qL G+ +A Pk+il++m++ gLt+e+v+SHLQkYR XP_020697109.1 190 KPRITWSPELHAKFINVVNQL-GISRAAPKKILDMMNISGLTRENVASHLQKYRK 243 79*******************.********************************6 PP | |||||||
2 | Myb_DNA-binding | 38.1 | 3.7e-12 | 194 | 242 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ +++++v+qlG +k+I +m+ g+t++++ s++qky+ XP_020697109.1 194 TWSPELHAKFINVVNQLGISraAPKKILDMMNiSGLTRENVASHLQKYR 242 6*****************999***************************7 PP | |||||||
3 | Response_reg | 70.5 | 7.1e-24 | 18 | 124 | 1 | 107 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+ +v++ l+ +l k gy +v++ +++ ealell++++ +Dl++ D++mp+mdG++ll+ i e++lp+i+++ + + + + + G XP_020697109.1 18 VLAVDDDSFVLRTLELLLLKCGY-RVTVSQHAFEALELLRANKddYDLVISDVKMPDMDGFKLLE-IVGLEMDLPVIMLSVDCDVKSVMKGIMHG 110 799********************.***************777777*******************7.5556679********************** PP ESEEEESS--HHHH CS Response_reg 94 akdflsKpfdpeel 107 a d+l+Kp eel XP_020697109.1 111 AVDYLTKPARLEEL 124 ********999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 510 aa Download sequence |
MDESDAEIPD GFPVGMSVLA VDDDSFVLRT LELLLLKCGY RVTVSQHAFE ALELLRANKD 60 DYDLVISDVK MPDMDGFKLL EIVGLEMDLP VIMLSVDCDV KSVMKGIMHG AVDYLTKPAR 120 LEELQLIWKH VARRSLDEKK DQNTRKQLGH AAKFEDFQKL HQPKKCKDRN KERDNEDSAD 180 SDEEMTPQKK PRITWSPELH AKFINVVNQL GISRAAPKKI LDMMNISGLT RENVASHLQK 240 YRKGLQKNAI ELSQQLFKHP GASAYTENSL LMTANPQRMA ICSFDRPHTN IYKNMSVASS 300 CTPAQQSCNG YSKVPSTSLF HSPTHQNNFC QQYAMNPHSG QLGTQQVTLT KNSYMMTAST 360 QVSSYQSFAP SSSQLDSAAQ SCSQNPRKVD VDSRLNSLYL LGHALDHQTV DMFISNNQSD 420 NYSVELDAVL SSVQKQQQFG SCLEADVEAG AHINWDSLDV QSSSHEDYMG SGPFKFPVGP 480 AEQFSAEITF AFNKVEHTDD LHAALKQFQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31920.1 | 1e-80 | ARR-B family protein |