PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020695121.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 208aa MW: 24310.7 Da PI: 7.2512 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.4 | 6e-19 | 77 | 131 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++++eq Lee F+ +++++ ++eeLA+klgL rqV vWFqNrRa+ k XP_020695121.1 77 RKKLRLNPEQSSMLEESFRAHNTLTSLQKEELAQKLGLFPRQVEVWFQNRRARTK 131 778899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 116.6 | 1.5e-37 | 77 | 164 | 1 | 88 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 +kk+rl+ eq+++LEesF+++++L++ +K+ela++Lgl prqv+vWFqnrRARtk+kq+E+d+e+L++++++l++en+rL+ e +eLr XP_020695121.1 77 RKKLRLNPEQSSMLEESFRAHNTLTSLQKEELAQKLGLFPRQVEVWFQNRRARTKLKQTEVDCEVLRTWCENLRDENRRLRMELQELR 164 69************************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MGEEEMCDTT LGLGIGKGGY KEGKGRRCEA DPTVRLHLWF PSCPKKEIEE EVEEERKQRL 60 TKSKSEDDDD NKLHGARKKL RLNPEQSSML EESFRAHNTL TSLQKEELAQ KLGLFPRQVE 120 VWFQNRRART KLKQTEVDCE VLRTWCENLR DENRRLRMEL QELRFYTEVS KVEETRVCSS 180 CEELMSVEEK GGGFVLGKKR ARVLQLCN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 126 | 134 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 2e-39 | HD-ZIP family protein |