PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020693411.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 299aa    MW: 34418.2 Da    PI: 5.0293
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020693411.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1752.2e-5471351128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPt+eelv +yL++k++++++++ evi+++d+yk+ePw+L+   k+  ee+  wyfFs++d+ky++g+r+nrat++g+Wkatg+dk+v
  XP_020693411.1   7 VPPGFRFHPTEEELVGYYLTRKIASQRIDV-EVITDIDLYKIEPWELQDicKIGCEEQdGWYFFSHKDRKYPSGSRTNRATNAGFWKATGRDKAV 100
                     69****************************.99**************9434444444459*********************************** PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +s k++++g++ktLvfy+grap+g+ktdW+mheyrl
  XP_020693411.1 101 VS-KSKVIGMRKTLVFYEGRAPNGRKTDWIMHEYRL 135
                     **.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MEVESWVPPG FRFHPTEEEL VGYYLTRKIA SQRIDVEVIT DIDLYKIEPW ELQDICKIGC  60
EEQDGWYFFS HKDRKYPSGS RTNRATNAGF WKATGRDKAV VSKSKVIGMR KTLVFYEGRA  120
PNGRKTDWIM HEYRLHSIEQ GPPQEEGWVV CRAFKKPSPS QRPCLSTYNA SYYLRESHDY  180
YQINQMETDT GVNNYNYESL HNHEIGSHET YKENQNVFEI PKLESPAGLP SSGLATKDSF  240
ETSIIGYDEE KNCGRDENGE QLIDWKVLDN LLASQLSEPA SCSYSKPLMA NTDYGSDNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.11e-100NAC family protein