PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020693165.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 236aa MW: 27634.8 Da PI: 6.8493 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.2 | 2.2e-19 | 4 | 49 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W +eEde+l+++v++lG+++W+tIa+++ gR++k+c++rw++ XP_020693165.1 4 RGHWRPEEDEKLKELVARLGPHNWNTIAEMLH-GRSGKSCRLRWYNQ 49 899*****************************.************96 PP | |||||||
2 | Myb_DNA-binding | 51.1 | 3.1e-16 | 56 | 99 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l+ ++ +G++ W+ Iar ++ gRt++ +k++w+ XP_020693165.1 56 RCPFSEEEEERLLVSHRIHGNR-WSIIARLFP-GRTDNAVKNHWHV 99 679*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MCTRGHWRPE EDEKLKELVA RLGPHNWNTI AEMLHGRSGK SCRLRWYNQL DPRINRCPFS 60 EEEEERLLVS HRIHGNRWSI IARLFPGRTD NAVKNHWHVI MARRSRERSK LQPKQPCISQ 120 ESHLIRKEKE KIMNFEFSKG LLFSSLIGGG NSGTLYGYKQ PISQSREEYN CWPNFHEAEG 180 ETSRESSIEF YDFLQVNSDS NETGECSRRE EEQDQHEKEQ QSEAGVPFID FLAVGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 5e-74 | MYB family protein |