PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020692852.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 282aa    MW: 31278 Da    PI: 7.6536
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020692852.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.52.5e-05256277223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                      Cp C+k F+++ +L+ H  +H
  XP_020692852.1 256 ICPLCSKAFRDPVLLVEHVENH 277
                     5*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MGTPALPSLG KHCCVEDCKL IDFLPFNCDR CNQVFCLQHK SYTKHPCPLT NQIDVTVLIC  60
PLCAQRVHLH PNEDPNITWD IHVNCECDPS NYQNATKKKL CPVPGCKEPL AFSNTIRCKD  120
CTLEHCLRHR FALDHECSGP KKSETGFSFI SVLRRSLKRE LTPIQSSNGS VKWCLNLRNS  180
ALNLRASAEA GMQKLSAATN HALQKAKEGF GAGGQLVEHC LQCPARFSNV NALIDHVEKV  240
HEDAVQKACA VVTIDICPLC SKAFRDPVLL VEHVENHENA TS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.17e-96C2H2 family protein