PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020692052.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family EIL
Protein Properties Length: 588aa    MW: 66505.8 Da    PI: 5.1033
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020692052.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3393.72.5e-120353771310
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                     ++l++rmwkd+++lkr++er+k     + +a ++ k +++++qa rkkm+raQDgiLkYMlk +evcna+GfvYgi+p+kgkpv+g+sd+LraWW
  XP_020692052.1  35 DDLSRRMWKDKIKLKRIRERQKL-A--ELQASQKPKAKQPSDQALRKKMARAQDGILKYMLKLVEVCNARGFVYGIVPDKGKPVSGSSDNLRAWW 126
                     69*************99998885.3..4445789999********************************************************** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS
            EIN3  96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190
                     kekv+fd+ngp ai+ y+ +  + +++++    ++++ hsl++lqD+tlgSLLs+lmqhcdppqr++plekg +pPWWP+G+e+ww +lgl+k q
  XP_020692052.1 127 KEKVKFDKNGPSAITLYDEEISATGNKEN----KRKNCHSLMDLQDATLGSLLSSLMQHCDPPQRKYPLEKGHPPPWWPSGNEDWWIHLGLPKGQ 217
                     *****************766666554443....589*********************************************************** PP

                     -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX.......XXXXXXXXXXX CS
            EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss.......slrkqspkvtl 276
                       ppykkphdlkk+wkv+vLt vikhmsp+i+++r + r+sk+lqdkmsakes+++l vl++ee + +++s +  +s       s+++++     
  XP_020692052.1 218 V-PPYKKPHDLKKVWKVGVLTGVIKHMSPNIDKVRTHIRKSKCLQDKMSAKESAIWLGVLSREEMITQQLSGDniMSditenqqSFQEERHGEDT 311
                     9.9********************************************************************997544233333333333333333 PP

                     XXXXXXXXX......XXXXXX.XXXXXXXXXX........................................XXXXXXXX CS
            EIN3 277 sceqkedve......gkkeskikhvqavktta........................................gfpvvrkr 310
                     ++++++dv       g      +        a                                        + + v++r
  XP_020692052.1 312 NSSNEYDVIefcdapG------S--------AssadvgkaqlvedqpslatipsttmelewrqpenlsdvaqNKEQVNER 377
                     3333444434332221......2........1222233334555667777777777777777777666665522222222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 588 aa     Download sequence    
MDKYAMVDGL ELEVYDVPCE NLTENDVSDE EIGEDDLSRR MWKDKIKLKR IRERQKLAEL  60
QASQKPKAKQ PSDQALRKKM ARAQDGILKY MLKLVEVCNA RGFVYGIVPD KGKPVSGSSD  120
NLRAWWKEKV KFDKNGPSAI TLYDEEISAT GNKENKRKNC HSLMDLQDAT LGSLLSSLMQ  180
HCDPPQRKYP LEKGHPPPWW PSGNEDWWIH LGLPKGQVPP YKKPHDLKKV WKVGVLTGVI  240
KHMSPNIDKV RTHIRKSKCL QDKMSAKESA IWLGVLSREE MITQQLSGDN IMSDITENQQ  300
SFQEERHGED TNSSNEYDVI EFCDAPGSAS SADVGKAQLV EDQPSLATIP STTMELEWRQ  360
PENLSDVAQN KEQVNERHER QRRKRPRLDS NTSGQFSGEH QNRNVVLEAE NDISVMNSVE  420
LPSTKYQPNS VIDVHSTDGL FTTQANQIEN QYLLSQSMTN RLFCPAPLNV CVQNMFVAGQ  480
PLLYPRRQYE EFTAPLVDHH ANPMNVSFPT SNPVNGDSLP LNGSSNSVPR DMNPFIEQAY  540
PIDPDKFIGG QFDSSVELPL DPFALSSPLI DIDNFQIDDE ALMEYLGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-151EIL family protein