PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020691641.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 227aa MW: 25519.8 Da PI: 8.3497 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.1 | 1.3e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l +++ +G+g +W + +++ g++R++k+c++rw++yl XP_020691641.1 14 RGPWSPEEDAALRSYIQNHGSGgNWIALPKKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 43.5 | 7.3e-14 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd+ + + + G++ W+ Ia++++ gRt++++k++w++ XP_020691641.1 69 GCFTKEEDDMIFTLYSKIGSR-WSVIASKLP-GRTDNDVKNYWNT 111 789******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MGRAPCCDKA NVKRGPWSPE EDAALRSYIQ NHGSGGNWIA LPKKAGLKRC GKSCRLRWLN 60 YLRPDIKHGC FTKEEDDMIF TLYSKIGSRW SVIASKLPGR TDNDVKNYWN TKLKKRMMEA 120 QATLSDNHSA APSQPVVPRV HSSAFINCVS IRPTDQTESQ SFINGSLGES LDLRVPRQNP 180 NYLELDFGSI ADLFYSSSYE ETIGTMWADA SEEIKLGEPS QSVTYLY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49690.1 | 3e-71 | MYB family protein |