PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020691477.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 388aa    MW: 42370.1 Da    PI: 9.7345
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020691477.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39.3e-19196245255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+g
  XP_020691477.1 196 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAALAYDREAFKLRG 245
                     59******9.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MEGGRKGGRG FQRGDVGEEV RRQKAKGTQI EIAAGRTEER QKPAETPMAA FRSLKKIRSP  60
DRHSSNQAST SPTLATASSS IASRPIFPFA YDSESAAISL FHSNQQQQKM ITFDQNQSFS  120
IGSGSYSAPP LSPLLPREAL QQRYSEQMLK YWSEALNLSP RGHMMMMSRL VAQENRGRSP  180
ASLFRIPGAV PTPTKLYRGV RQRHWGKWVA EIRLPRNRTR LWLGTFDTAE DAALAYDREA  240
FKLRGKNARL NFPSLFLGAA EGSNSNNADS SSDMTRTEVS KDSGSPPPEN SKAQAEAKPA  300
GQSSEGTELV WSEAEEAWFS AWGPGSSVWD DVDGARGNLL FQSGLASISE SQSDCIQAPA  360
FAGVGMETSS SSSSSPAFSP SMFIWKDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.18e-48ERF family protein