PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020690104.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 200aa MW: 23010.5 Da PI: 5.7223 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.6 | 2.5e-17 | 22 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l+++++ +G g W+ ar g++Rt+k+c++rw++yl XP_020690104.1 22 KGPWTMEEDLILINYIANHGEGVWNNLARSAGLKRTGKSCRLRWLNYL 69 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.4 | 6e-17 | 75 | 118 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+ ++++++G++ W++Iar ++ gRt++++k++w++ XP_020690104.1 75 RGNITPEEQLLIMELHARWGNR-WSKIARQLP-GRTDNEIKNYWRT 118 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MVEESSNMDK RINGNQEAEV RKGPWTMEED LILINYIANH GEGVWNNLAR SAGLKRTGKS 60 CRLRWLNYLR PDVRRGNITP EEQLLIMELH ARWGNRWSKI ARQLPGRTDN EIKNYWRTRI 120 QKKVKNGDAA DYSSQMIIDE ASTSHTSSIE EGIAQQSYPV HPNTNPEGYP PSYNTGELGE 180 NFWSVEDFWS IQSDQSLNGD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27810.1 | 9e-80 | MYB family protein |