PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020689913.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 317aa    MW: 35188.2 Da    PI: 5.5134
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020689913.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.41.3e-16103153155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+GVr+++ +g++ AeIrdp     r  r++lg++ ta eAa  +++a+ +l+g
  XP_020689913.1 103 PRYRGVRRRP-WGKFSAEIRDPA----RrVRIWLGTYSTAIEAAMVYDNAAIQLRG 153
                     68********.**********82....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MERNDVHAIK HTDRVRVSSK FIGKKSVGGS ARSSAAFPRT LRIFCDDPDA TDSSDDEACF  60
NRRLIKRYIE EIRFEERPLS KTIGKKKKKK NSPEMFQSPD EIPRYRGVRR RPWGKFSAEI  120
RDPARRVRIW LGTYSTAIEA AMVYDNAAIQ LRGPHAATNF PNRASLTAAS ASPNFTVSHG  180
YESSEDSRNV STSSPTTVLH GFSSDAVKGS TEKVSSSVGN GLSPELKIDF NVFDEMLQYN  240
EFSDTGIYGW GDPPSDLTDD FLVFDKMPDT YEPAIFEKVA AGDRSIDAGE RIGTEICGEG  300
EDLFAGISDL FPLDSLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-33ERF family protein