PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020688973.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 222aa MW: 25785.2 Da PI: 6.9242 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.7 | 2.2e-17 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l+d++ q+G g+W++I+++ g+ R +k+c++rw +yl XP_020688973.1 15 KGLWSPEEDQKLKDYILQYGHGCWSSIPAKAGLQRNGKSCRLRWINYL 62 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 58.3 | 1.8e-18 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +T eE+e++ ++++lG++ W++Ia++++ gRt++++k++w++yl XP_020688973.1 68 RGIFTSEEEEIIMSLHAKLGNK-WSRIAAHLP-GRTDNEIKNYWNSYL 113 7889******************.*********.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MRLRTCEKQK VNYRKGLWSP EEDQKLKDYI LQYGHGCWSS IPAKAGLQRN GKSCRLRWIN 60 YLRPGLKRGI FTSEEEEIIM SLHAKLGNKW SRIAAHLPGR TDNEIKNYWN SYLKKKVLQL 120 NHQNTIISSK ELINTSMNQT FNSENFQLES INQISTSSAC SINDNGSFKS SFPKVLFEEW 180 LSPQDMGGRE EFDDNGLFEE MQSLDMLGEM IGDIDMSYDF IY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48920.1 | 7e-63 | MYB family protein |