PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020687480.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TALE

Protein Properties

Length: 500aa MW: 56861 Da PI: 5.3407

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020687480.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.8	1.8e-08	422	460	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e++ LA + gLt +qV++WF N R + XP_020687480.1 422 MFQNflHPYPKDNEKQLLALRSGLTRNQVSNWFINARVR 460 5887779******************************88 PP
2	BELL	56.4	7.4e-19	294	363	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +q+ ++ k+ L+++l +Vd+r++q+ +q+q v+ssF+a a gs ++ +++Al +iS +++++ ia+ i XP_020687480.1 294 KQQSNSSKSELINMLAMVDQRFNQFLDQIQNVVSSFNAKAASGS-NLPAKFALTTISNFYKNIRSTIADEI 363 56778899*********************************9.899*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MMENGVFDPV SSLIDHSYMA MDGFSTSMLS GSHIMSGVSD HGRFRQILHT NPLYLTYKEE 60 VLRNMNHNGN SSIQNTNFRE NNVHSGFLTS PKDDNSDFHL NCKEIYDEFS ANQFSSTLTS 120 SSFHPSYLVG SSEQGTLSFD NELSLRLGSS HPSVLNLPNV NDLYIDESYS DKTQVMSSSG 180 SGGGSKDINK MYNFTNENYL FENVQKFPNS GSSRVPLDLR YLHAIQEILA ELTSNAVEDV 240 EEIDDSLADL VSEANMSSSS GSTVKGFRET GFNVLPFCSV ENEYEQEMDC QPQKQQSNSS 300 KSELINMLAM VDQRFNQFLD QIQNVVSSFN AKAASGSNLP AKFALTTISN FYKNIRSTIA 360 DEIVSNGREP SSECMQEEER NFESSFIQRQ WDLQQLKQRD QPSWRPQRGL PEKSVSVLRA 420 WMFQNFLHPY PKDNEKQLLA LRSGLTRNQV SNWFINARVR LWKPMIEEMY TEIHKKNRAE 480 GSCGQRRRHG NIYCQRNQTS

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MMENGVFDPV SSLIDHSYMA MDGFSTSMLS GSHIMSGVSD HGRFRQILHT NPLYLTYKEE  60
VLRNMNHNGN SSIQNTNFRE NNVHSGFLTS PKDDNSDFHL NCKEIYDEFS ANQFSSTLTS  120
SSFHPSYLVG SSEQGTLSFD NELSLRLGSS HPSVLNLPNV NDLYIDESYS DKTQVMSSSG  180
SGGGSKDINK MYNFTNENYL FENVQKFPNS GSSRVPLDLR YLHAIQEILA ELTSNAVEDV  240
EEIDDSLADL VSEANMSSSS GSTVKGFRET GFNVLPFCSV ENEYEQEMDC QPQKQQSNSS  300
KSELINMLAM VDQRFNQFLD QIQNVVSSFN AKAASGSNLP AKFALTTISN FYKNIRSTIA  360
DEIVSNGREP SSECMQEEER NFESSFIQRQ WDLQQLKQRD QPSWRPQRGL PEKSVSVLRA  420
WMFQNFLHPY PKDNEKQLLA LRSGLTRNQV SNWFINARVR LWKPMIEEMY TEIHKKNRAE  480
GSCGQRRRHG NIYCQRNQTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	4e-65	TALE family protein