PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020687474.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TALE

Protein Properties

Length: 543aa MW: 61434.1 Da PI: 5.6278

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020687474.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.7	2e-08	465	503	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e++ LA + gLt +qV++WF N R + XP_020687474.1 465 MFQNflHPYPKDNEKQLLALRSGLTRNQVSNWFINARVR 503 5887779******************************88 PP
2	BELL	56.2	8.4e-19	337	406	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +q+ ++ k+ L+++l +Vd+r++q+ +q+q v+ssF+a a gs ++ +++Al +iS +++++ ia+ i XP_020687474.1 337 KQQSNSSKSELINMLAMVDQRFNQFLDQIQNVVSSFNAKAASGS-NLPAKFALTTISNFYKNIRSTIADEI 406 56778899*********************************9.899*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MMENGVFDPV SSLIDHSYMA MDGFSTSMLS GSHIMSGVSD HGRFRQILHT NPLYLTYKEE 60 VLRNMNHNGN SSIQNTNFRE NNVNSSIACS SLFTFDEMRN STSNGSCSTP NLSSKISKCS 120 KFVPQVHSGF LTSPKDDNSD FHLNCKEIYD EFSANQFSST LTSSSFHPSY LVGSSEQGTL 180 SFDNELSLRL GSSHPSVLNL PNVNDLYIDE SYSDKTQVMS SSGSGGGSKD INKMYNFTNE 240 NYLFENVQKF PNSGSSRVPL DLRYLHAIQE ILAELTSNAV EDVEEIDDSL ADLVSEANMS 300 SSSGSTVKGF RETGFNVLPF CSVENEYEQE MDCQPQKQQS NSSKSELINM LAMVDQRFNQ 360 FLDQIQNVVS SFNAKAASGS NLPAKFALTT ISNFYKNIRS TIADEIVSNG REPSSECMQE 420 EERNFESSFI QRQWDLQQLK QRDQPSWRPQ RGLPEKSVSV LRAWMFQNFL HPYPKDNEKQ 480 LLALRSGLTR NQVSNWFINA RVRLWKPMIE EMYTEIHKKN RAEGSCGQRR RHGNIYCQRN 540 QTS

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MMENGVFDPV SSLIDHSYMA MDGFSTSMLS GSHIMSGVSD HGRFRQILHT NPLYLTYKEE  60
VLRNMNHNGN SSIQNTNFRE NNVNSSIACS SLFTFDEMRN STSNGSCSTP NLSSKISKCS  120
KFVPQVHSGF LTSPKDDNSD FHLNCKEIYD EFSANQFSST LTSSSFHPSY LVGSSEQGTL  180
SFDNELSLRL GSSHPSVLNL PNVNDLYIDE SYSDKTQVMS SSGSGGGSKD INKMYNFTNE  240
NYLFENVQKF PNSGSSRVPL DLRYLHAIQE ILAELTSNAV EDVEEIDDSL ADLVSEANMS  300
SSSGSTVKGF RETGFNVLPF CSVENEYEQE MDCQPQKQQS NSSKSELINM LAMVDQRFNQ  360
FLDQIQNVVS SFNAKAASGS NLPAKFALTT ISNFYKNIRS TIADEIVSNG REPSSECMQE  420
EERNFESSFI QRQWDLQQLK QRDQPSWRPQ RGLPEKSVSV LRAWMFQNFL HPYPKDNEKQ  480
LLALRSGLTR NQVSNWFINA RVRLWKPMIE EMYTEIHKKN RAEGSCGQRR RHGNIYCQRN  540
QTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	6e-65	TALE family protein