PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020686609.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | TALE | ||||||||
Protein Properties | Length: 649aa MW: 71464.3 Da PI: 7.2998 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.2 | 3.3e-09 | 363 | 400 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + XP_020686609.1 363 FEHflHPYPKDSDKLMLAKQTGLTRSQVSNWFINARVR 400 664459******************************88 PP | |||||||
2 | BELL | 119.6 | 1.4e-38 | 225 | 296 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqelq+kkakL+ +l eV++rY+qy++q+q+v+ssFeavag+gsa+ Yt+lAl++iS++FrcL+dai++q+ XP_020686609.1 225 ERQELQMKKAKLVGMLGEVEQRYRQYHHQMQIVVSSFEAVAGHGSARTYTALALQTISKQFRCLRDAISGQL 296 79*******************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 649 aa Download sequence |
MATYFHGAPE IHPDGLQTLY LMNPGYVGYA DPAGAPAANM VFLNSGGITS LNPINLSHSP 60 PPNHQQQHFV GIPLPQPQEN SAGRFHYNLW SQAPATNLMG RGTTQQGLSL SLSPQQPHPY 120 GSYRAEAEVS APMPEMTIAG DDGVRPMGTT GPPGTAGIQS VLMNSKYLKA AQELLDEVVS 180 VGKGVGAETM KKNGEKSPMK SSKELDVKGE GESSGKREAE LTTAERQELQ MKKAKLVGML 240 GEVEQRYRQY HHQMQIVVSS FEAVAGHGSA RTYTALALQT ISKQFRCLRD AISGQLKATG 300 RSLGEEDCLV GGAKSIGSRL RLVDHHLRQQ RALQQLGMMQ HNAWRPQRGL PERAVSILRA 360 WLFEHFLHPY PKDSDKLMLA KQTGLTRSQV SNWFINARVR LWKPMVEEMY VEETKEHEQM 420 KPEEKSSYSE SNEDSTSKAS SQTKTEQANS FTSKKQDKSN EPKPSSSIAI PVTKFGISNN 480 HDEESLMQPF LKKVRNNESL HLNPLPHSLT LEMKPEEFSN RELLMKFMEA RSNANNGHAL 540 MNGGGNHGGG FNAYSIGDIG RFDTEQFTPS FHGNGVSLTL GLQHCESLSL TGTEPPYLSN 600 ESIPMGNEAN AFCSLNNNPQ ASHPSNAYES IDIQNRKRFA AQLLPDFVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35940.1 | 1e-112 | TALE family protein |