PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020685093.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 294aa MW: 32562.3 Da PI: 5.1123 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 83.8 | 1.7e-26 | 119 | 178 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 dDg++WrKYGqK++ ++++prsY+rCt++ gC++ k+v+rs++dp++ +itY geH++ XP_020685093.1 119 DDGHTWRKYGQKDIFSAKYPRSYFRCTHKfdqGCKASKQVQRSEDDPSLYVITYFGEHTC 178 8***************************9999**************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
MGSQDEEILS PPIWKSAAMK ELARGLDSVA KLASLLQAAS SENGRPEAAT AGLLAEEIMC 60 RISKAMAALE SGGNIPSSCV TGNKEGVGGK SKMQSTRKAG YRRRGSPYSW TRITSNTIDD 120 GHTWRKYGQK DIFSAKYPRS YFRCTHKFDQ GCKASKQVQR SEDDPSLYVI TYFGEHTCVD 180 AKKATITPSR ELCIISFESS NGENIKQETL TSFPSLNQES EEEVLSNLTS ADSASDYFVS 240 PKVDIKKSEE QTAAELGQEH NGLPLALYSS LMNYGMEFMD YEEFLNFDHD LFQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 2e-28 | WRKY family protein |