PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020683477.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 282aa MW: 31155.8 Da PI: 7.943

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020683477.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.5	7.3e-34	47	101	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl XP_020683477.1 47 RQRLRWTNELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 101 58****************************************************8 PP
2	Myb_DNA-binding	63.6	3.8e-20	49	100	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++qky+ XP_020683477.1 49 RLRWTNELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 100 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MYQRSLSNVS LASCFSIAHD QHIEMNSSVA SPHAGGNNLN NPGSTARQRL RWTNELHERF 60 VDAVAQLGGP DRATPKGVLR VMGVQGLTIY HVKSHLQKYR LAKYLPDSSA EGAKVEKKES 120 DDVLSNLENS TGMQITEALK LQMEVQKRLH EQLEVQRQLQ LRIEAQGKYL KKIIEEQQRL 180 SGGLTPTSTN QSLEDKSDPS TPVPITKSSF QEKSNGSLFN SFSFEDSHHG PLTPETGSPS 240 ASPKHERSVR RQGDNDSPKH ELLLGHHILE SSSSSLFLGS GL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	3e-80	G2-like family protein