PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020682892.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 291aa MW: 33548.1 Da PI: 9.0748 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.4 | 1.4e-17 | 10 | 57 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++lv+ v ++G ++W+ Ia+ g++Rt+k+c++rw +yl XP_020682892.2 10 KGPWTEQEDLQLVCFVSLFGERRWDFIAKVSGLKRTGKSCRLRWVNYL 57 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.9 | 9.5e-18 | 63 | 108 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgr T++E+ l+++++ q+G++ W++Iar+++ gRt++++k++w++++ XP_020682892.2 63 RGRITPQEERLILELHSQWGNR-WSRIARRLP-GRTDNEIKNYWRTHM 108 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
MVVTKEGIRK GPWTEQEDLQ LVCFVSLFGE RRWDFIAKVS GLKRTGKSCR LRWVNYLHPG 60 LKRGRITPQE ERLILELHSQ WGNRWSRIAR RLPGRTDNEI KNYWRTHMRK MAQERKKSSP 120 LSSSTCSSES EQLEEAVGME KHEQSSYMMT RALDIKEEDE VLKVYPMDQI WNEIAGTLES 180 TTSGLSFERY GQEACNISCN SASMPSPLWQ NCAESLWKID DDDDDVDLSR VLRHDRLTDA 240 VELRRGRTIA LEAHLRGSLQ GSANVREFKR TSAARILVGV RVSCATRRKG M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59780.3 | 3e-75 | MYB family protein |