PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020682864.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 539aa MW: 60658.9 Da PI: 4.2536

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020682864.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.8	1.8e-52	25	153	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv++yLk+kv+gk++++ ++i+e+d+y++ePwdLp +++++++ ewyfF++ d+ky++ r+nrat +gyWk+tgkd+++ XP_020682864.1 25 LAPGFRFHPTDEELVSYYLKRKVTGKPIRV-DAISEIDLYRAEPWDLPlrSRIRSRDLEWYFFTSLDRKYSNRLRTNRATIDGYWKTTGKDRSIQ 118 579*************************.99***********6347778888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrle 129 + +++++g+kktLv+++grap+g++t+Wvmheyrle XP_020682864.1 119 H-RSRTIGMKKTLVYHSGRAPRGQRTNWVMHEYRLE 153 .999****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MISEASCSEI PLESPPPPVE ACTQLAPGFR FHPTDEELVS YYLKRKVTGK PIRVDAISEI 60 DLYRAEPWDL PLRSRIRSRD LEWYFFTSLD RKYSNRLRTN RATIDGYWKT TGKDRSIQHR 120 SRTIGMKKTL VYHSGRAPRG QRTNWVMHEY RLEDENLTRA GIPQDGYVVC RIFQKSGPGP 180 QNGAQYGAPF MEEEWEMEEE DAKLVPVNAD RDDAVVDPVG QDFVQLGDFL QNPDSNIQHL 240 AAFPFESRSA EHEFGSQTED STIFVDEIFK ALDSLDDMTQ DADFSAPQVT NTTLNRLGER 300 EGPEDQSKFT SIHSNGYVQL DDIFVEGNAN FCSDAHLSHC TLEKGNNNSE VDGMCPSKIL 360 LQKPVEGDSP SANSTNQLDQ LQMCPAVQHD MFPQPFDPLD AVPWEYSGQL AEGNSVYYDA 420 LNHEVPYSED GFTFEASLSP LAEFDFSEDL MGYFDAKDNL IYGSPDLFLS QFKLANSDEW 480 VEPNDSPEVV GSSSLSRKDV FHVEENLVQQ SSLEKKRTGD GPLGGLNDNL TGMIIDSNS

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MISEASCSEI PLESPPPPVE ACTQLAPGFR FHPTDEELVS YYLKRKVTGK PIRVDAISEI  60
DLYRAEPWDL PLRSRIRSRD LEWYFFTSLD RKYSNRLRTN RATIDGYWKT TGKDRSIQHR  120
SRTIGMKKTL VYHSGRAPRG QRTNWVMHEY RLEDENLTRA GIPQDGYVVC RIFQKSGPGP  180
QNGAQYGAPF MEEEWEMEEE DAKLVPVNAD RDDAVVDPVG QDFVQLGDFL QNPDSNIQHL  240
AAFPFESRSA EHEFGSQTED STIFVDEIFK ALDSLDDMTQ DADFSAPQVT NTTLNRLGER  300
EGPEDQSKFT SIHSNGYVQL DDIFVEGNAN FCSDAHLSHC TLEKGNNNSE VDGMCPSKIL  360
LQKPVEGDSP SANSTNQLDQ LQMCPAVQHD MFPQPFDPLD AVPWEYSGQL AEGNSVYYDA  420
LNHEVPYSED GFTFEASLSP LAEFDFSEDL MGYFDAKDNL IYGSPDLFLS QFKLANSDEW  480
VEPNDSPEVV GSSSLSRKDV FHVEENLVQQ SSLEKKRTGD GPLGGLNDNL TGMIIDSNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	3e-90	NAC family protein