PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020682129.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | YABBY | ||||||||
Protein Properties | Length: 177aa MW: 19550.1 Da PI: 8.0856 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 79 | 1.5e-24 | 5 | 62 | 5 | 62 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaesh 62 +++vCyv+CnfCntil+vsvP + l+ +vtvrCGhC +llsvn+ + q ++ ++ XP_020682129.1 5 AVPDHVCYVHCNFCNTILVVSVPGSNLSATVTVRCGHCGNLLSVNMGVPPQSMPFQDL 62 579*******************************************998888887774 PP | |||||||
2 | YABBY | 122.2 | 7.6e-38 | 92 | 151 | 110 | 170 |
YABBY 110 prvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +pp i+P ekrqrvPsaynrfikeei+r+ka+nPdishreafsaaaknWahfP+ihfgl XP_020682129.1 92 LDMPP-IHPQEKRQRVPSAYNRFIKEEIRRLKATNPDISHREAFSAAAKNWAHFPNIHFGL 151 33455.99***************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MSAPAVPDHV CYVHCNFCNT ILVVSVPGSN LSATVTVRCG HCGNLLSVNM GVPPQSMPFQ 60 DLQGAQLLRW NCESSSNCNR ISLFNAVGSN QLDMPPIHPQ EKRQRVPSAY NRFIKEEIRR 120 LKATNPDISH REAFSAAAKN WAHFPNIHFG LNHDGNSQVK IDDAIPAHGV QNSQGYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 5e-62 | YABBY family protein |