PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020681730.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | G2-like | ||||||||
Protein Properties | Length: 223aa MW: 25020.2 Da PI: 9.3585 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 108 | 5.2e-34 | 23 | 77 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl XP_020681730.1 23 RQRLRWTNELHERFVDAVTQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 77 58****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 65 | 1.4e-20 | 25 | 76 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++qky+ XP_020681730.1 25 RLRWTNELHERFVDAVTQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 76 89*************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MNISTMAPHA GGNNQNLHGA ASRQRLRWTN ELHERFVDAV TQLGGPDRAT PKGVLRVMGV 60 QGLTIYHVKS HLQKYRLAKY LPDSSAEGTK ENKESDDVLS KLDNSSGMQI TEALKLQMEV 120 QKRLHEQLEV QRQLQLRIEA QGKYLKKIIE EQQRLNGGVP QISADQCTED KTVPSKSSLK 180 DKSKTNFLHS LSFEDSHHEP HTPETGSPLT SPKHELQVKG QMS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 8e-75 | G2-like family protein |