PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020681729.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 223aa MW: 25020.2 Da PI: 9.3585

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020681729.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108	5.2e-34	23	77	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl XP_020681729.1 23 RQRLRWTNELHERFVDAVTQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 77 58****************************************************8 PP
2	Myb_DNA-binding	65	1.4e-20	25	76	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++qky+ XP_020681729.1 25 RLRWTNELHERFVDAVTQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 76 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MNISTMAPHA GGNNQNLHGA ASRQRLRWTN ELHERFVDAV TQLGGPDRAT PKGVLRVMGV 60 QGLTIYHVKS HLQKYRLAKY LPDSSAEGTK ENKESDDVLS KLDNSSGMQI TEALKLQMEV 120 QKRLHEQLEV QRQLQLRIEA QGKYLKKIIE EQQRLNGGVP QISADQCTED KTVPSKSSLK 180 DKSKTNFLHS LSFEDSHHEP HTPETGSPLT SPKHELQVKG QMS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	8e-75	G2-like family protein