PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020681687.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 238aa MW: 28032.3 Da PI: 6.0601 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.1 | 1.5e-16 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+ll++ vk++G g+W++++r g++R++k+ ++rw +yl XP_020681687.1 17 KGPWTPQEDQLLIEHVKLHGEGRWNSVSRLTGLKRSGKSSRLRWVNYL 64 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.1 | 7.6e-17 | 70 | 114 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T+ E+ +++++++++G++ W+tIar ++ gRt++++k++w+++ XP_020681687.1 70 RGKITPHEETIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 114 8999******************.*********.************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 238 aa Download sequence |
MEGQYYGWGT VADGWRKGPW TPQEDQLLIE HVKLHGEGRW NSVSRLTGLK RSGKSSRLRW 60 VNYLRPDLKR GKITPHEETI ILELHARWGN RWSTIARSLP GRTDNEIKNY WRTHFKKSTK 120 NVDKARARYL RLQQEQKQLL QQQQQQQQQQ LLLLESSTVK EETTLTEEAI MAQEMQEIAF 180 MCSNLPFMYQ EEAGFVGESR TSSEDRSSEE ETCYDTWDNL WNLDDIEISL GEQALSFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G24310.1 | 1e-67 | MYB family protein |