PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020680750.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 224aa MW: 26083 Da PI: 7.7097 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.8 | 5.3e-18 | 14 | 59 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l+++v+++G+ +W++Ia++++ gR++k+c++rw++ XP_020680750.1 14 RGHWRPAEDEKLKQLVEEFGPQNWNSIAEKLQ-GRSGKSCRLRWFNQ 59 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 57 | 4.4e-18 | 66 | 109 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l+ a+ +G++ W++Iar ++ gRt++ +k++w+ XP_020680750.1 66 RRPFTEEEEERLLAAHGFHGNK-WALIARLFP-GRTDNAVKNHWHV 109 679*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MAADKPEENK LCPRGHWRPA EDEKLKQLVE EFGPQNWNSI AEKLQGRSGK SCRLRWFNQL 60 DPRINRRPFT EEEEERLLAA HGFHGNKWAL IARLFPGRTD NAVKNHWHVI MARRQREKTK 120 FLTNQSSFHE EDHSHIFNQA ETSCSISSNQ LNHYEYNYGN LGSSHHPLQK LSNSSTIYWR 180 FGVLEEHRGC LRDASGGVNK EEKDDETLRS KDVPYIDFLG VGKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 3e-67 | MYB family protein |