PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020680641.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 297aa MW: 33767.1 Da PI: 6.3994 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.1 | 4.3e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +v+++G+g+W++++ g+ R+ k+c++rw +yl XP_020680641.1 14 KGPWTPEEDIILVSYVQEHGPGNWRLVPTNSGLMRCSKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.1 | 2.6e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++ E+e+++++ ++lG++ W++Ia++++ Rt++++k++w+++l XP_020680641.1 67 RGNFNSHEEEIIIQLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112 899*******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MGRSPCCDKT GIKKGPWTPE EDIILVSYVQ EHGPGNWRLV PTNSGLMRCS KSCRLRWTNY 60 LRPGIKRGNF NSHEEEIIIQ LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKIKTFQ 120 AARSNYITSS DSAGSTIQER VHGGYPIEEI RNSGTSNSHI LAHNSSTYAS SAENISRLLE 180 GWMRSSPSQT LSDEKLQHQM INNYDSFIMN QLNFNVEINS QLLLEDSVNG VDKTALDSVF 240 EEKKQFKMVA SDLNKLESQS QQPPMFMLEK WLLEENTGLM DAFLELSSAD CCSELMF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08810.1 | 2e-96 | MYB family protein |