PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020679104.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 602aa MW: 67376.9 Da PI: 4.5495

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020679104.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.7	3.3e-51	39	165	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppG+rFhPtdeelv +yLk+k+ +++++ ++ e+d+yk+ePw+Lp k +++++k+w+fFs+rd+ky++g+r+nratk+gyWkatgkd+ + + XP_020679104.1 39 PPGVRFHPTDEELVLFYLKRKICRQRIKP-AMVGEADVYKCEPWELPeKsLLRKGDKQWFFFSPRDRKYPNGSRSNRATKHGYWKATGKDRGISH 132 8***********************999.78**********95346677999*********************************9 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ g kktLv+y+grapkg++tdWvmhey+l XP_020679104.1 133 -HSKTAGNKKTLVYYRGRAPKGVRTDWVMHEYTL 165 .999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MGAAADCSAP VGRRISSACD DDEEYQDVGR QLGESKRWPP GVRFHPTDEE LVLFYLKRKI 60 CRQRIKPAMV GEADVYKCEP WELPEKSLLR KGDKQWFFFS PRDRKYPNGS RSNRATKHGY 120 WKATGKDRGI SHHSKTAGNK KTLVYYRGRA PKGVRTDWVM HEYTLDENFL VSFKNMQDSY 180 ALYKLFMKSG PGPKNGEQYG APFREEEWDD VAVDESFMDQ NDGDGMSAAI LTSNSIPVTF 240 SEGCDTSPVC DLEDLLFHLS QEQEIVQGDL DFSAYTSDLS KLQVDLEPEN GSHVMNLSYV 300 DADDSFLGID TGGENSSMEM RFQNIQPELA HSQPIGLPNM ISNQHIVTTD EEFLEIKDLN 360 DPMTSFYLDD ITDRNLTFDT DVFFDPFDQF DANMLLTESL GVPMDPFDQF NVNMLLTESL 420 GVPLDPKTPH HHFDSFSEED PQNNALHISS QLWAHEENYN LTTFANTNEV VALTPPAAGF 480 PIASNLPSTS EIHFVEQIGP AESPSPSWFN STLSGFLHSV PSSPAFASEN ALISRAFERV 540 SSFRAAQVNP QQRASASGGH RSNDRGYLFI SGLVGIVAVF SVLIVGTAFQ VFKGLWGRFI 600 SS

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MGAAADCSAP VGRRISSACD DDEEYQDVGR QLGESKRWPP GVRFHPTDEE LVLFYLKRKI  60
CRQRIKPAMV GEADVYKCEP WELPEKSLLR KGDKQWFFFS PRDRKYPNGS RSNRATKHGY  120
WKATGKDRGI SHHSKTAGNK KTLVYYRGRA PKGVRTDWVM HEYTLDENFL VSFKNMQDSY  180
ALYKLFMKSG PGPKNGEQYG APFREEEWDD VAVDESFMDQ NDGDGMSAAI LTSNSIPVTF  240
SEGCDTSPVC DLEDLLFHLS QEQEIVQGDL DFSAYTSDLS KLQVDLEPEN GSHVMNLSYV  300
DADDSFLGID TGGENSSMEM RFQNIQPELA HSQPIGLPNM ISNQHIVTTD EEFLEIKDLN  360
DPMTSFYLDD ITDRNLTFDT DVFFDPFDQF DANMLLTESL GVPMDPFDQF NVNMLLTESL  420
GVPLDPKTPH HHFDSFSEED PQNNALHISS QLWAHEENYN LTTFANTNEV VALTPPAAGF  480
PIASNLPSTS EIHFVEQIGP AESPSPSWFN STLSGFLHSV PSSPAFASEN ALISRAFERV  540
SSFRAAQVNP QQRASASGGH RSNDRGYLFI SGLVGIVAVF SVLIVGTAFQ VFKGLWGRFI  600
SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	4e-89	NAC family protein