PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020678769.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 232aa MW: 26149.3 Da PI: 4.7388 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56 | 9.2e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+lv +++ +G ++W++ +++ g+ R++k+c++rw +yl XP_020678769.1 14 KGQWTPEEDEILVSYIQNYGHENWRALPKEAGLLRCGKSCRLRWINYL 61 799*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 52.6 | 1.1e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ ++ ++++lG++ W++Ia +++ gRt++++k+ w+++l XP_020678769.1 67 RGNFTKEEEDAIISLHQMLGNR-WSAIAMMLP-GRTDNEIKNVWNTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MVRAPCCEKV GLNKGQWTPE EDEILVSYIQ NYGHENWRAL PKEAGLLRCG KSCRLRWINY 60 LRPGIKRGNF TKEEEDAIIS LHQMLGNRWS AIAMMLPGRT DNEIKNVWNT HLKKRLNPNQ 120 ILPKSKRKMQ RQDNLNSIME FSSASVSESC SDFSSSCTES SNVTEGDSNN ASGNDGSLES 180 RHDLGVEEID ESLSMNGCDD SPLMVAGSPI EEDMSFWLRI FEAGELEGFP EI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 9e-73 | MYB family protein |