PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020677993.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 178aa MW: 19931.2 Da PI: 8.2867 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 48.9 | 1.2e-15 | 63 | 154 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f +v+ s+v ++ l +pkkf + +++s+ ++ + ++W k+ + +++ v+++GWk+Fv +n+Lk gD +vF+l++++e + +v+ XP_020677993.1 63 FTSVMGESSVRSQYFLKIPKKFR-PYL--PPSSTRIV-LCCREKEWFAKY--KVYKNVKVIREGWKQFVVDNDLKIGDGCVFELMNDKELKIRVQ 151 677888899999999*******6.663..44665555.55699*******..9999999**************************99***99999 PP EE- CS B3 96 vfr 98 +++ XP_020677993.1 152 ILN 154 986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 178 aa Download sequence |
MAGALPCCSE EEVCGSVGSC PKKCVGCASC QNEPACKEPN NLTEHNAATL KDKIVPLEGK 60 PYFTSVMGES SVRSQYFLKI PKKFRPYLPP SSTRIVLCCR EKEWFAKYKV YKNVKVIREG 120 WKQFVVDNDL KIGDGCVFEL MNDKELKIRV QILNGELPAT KSTCFTVGRN IDNPILIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G33280.1 | 1e-09 | B3 family protein |