PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020677691.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 316aa MW: 34597.1 Da PI: 9.795 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59 | 1.1e-18 | 12 | 57 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v ++G ++W++I++ ++ gR++k+c++rw + XP_020677691.1 12 KGPWSPEEDEMLQRLVVKHGARNWSLISKSIP-GRSGKSCRLRWCNQ 57 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 55 | 1.9e-17 | 66 | 108 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEd ++ a++++G++ W+tIar ++ gRt++ +k++w++ XP_020677691.1 66 PFTPEEDRTIISAHQRFGNK-WATIARLLN-GRTDNAIKNHWNST 108 89******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MAARGRDMDR IKGPWSPEED EMLQRLVVKH GARNWSLISK SIPGRSGKSC RLRWCNQLSP 60 TVEHRPFTPE EDRTIISAHQ RFGNKWATIA RLLNGRTDNA IKNHWNSTLK RKYSGAAMEE 120 EGRSLKRSNS AGLSFSPGSP SSSDVSDSSH HSHPLMTPPP MVTPVYRPVP RAGCIVPTQL 180 PPAIDTAAAS NSSGSGSNLI PDPVTSLTLS LPGLSSDQSE ASDHRHRQNQ TDLLHLAPPS 240 EPEKKPLHAA SAISAPTTAS AFPFSTELLA VMQEMIRQEV RNYLSGMELS EAMSVNPPHE 300 SLRNNVMKRI GIAKID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67300.1 | 5e-65 | MYB family protein |