PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020677547.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | C2H2 | ||||||||
Protein Properties | Length: 224aa MW: 23578.5 Da PI: 8.0744 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.7 | 0.00018 | 80 | 102 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ Cgk F + L H +H XP_020677547.1 80 YKCSVCGKAFASYQALGGHKASH 102 9***********99998888877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MAFDAMTEPP MVTSEDTSSP PQPRVEGWAK RKRSKRHRYF DHQPTEEEYL ALCLLMLARG 60 GADQRLPPLP FTPPAEGLSY KCSVCGKAFA SYQALGGHKA SHRKHPGGAV DDAASSASGS 120 SAVIASAGGK VHRCSICQKE FSTGQALGGH KRCHYDGSGA AAAAAAAAAS SSSEVASSGQ 180 REFDLNIPAA AEFVFEGSWR CVGTEDGEVQ SPLALKKPRF LIPA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 3e-46 | C2H2 family protein |