PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020677118.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | B3 | ||||||||
Protein Properties | Length: 726aa MW: 80599.3 Da PI: 5.4894 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 34.2 | 4.5e-11 | 46 | 113 | 15 | 86 |
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 l +p a + +g +k + +ed g+ W+vk+ + +g+ +++GW +Fv+++ + +g+fv+F+++g XP_020677118.1 46 VLFIPPMAACTLKGL--AKKYVYIEDAFGKYWNVKM--SMVDGSLAFQNGWCDFVSDHCITVGEFVLFTYTG 113 466676666445333..3457***************..88889999***********************986 PP | |||||||
2 | B3 | 34 | 5.4e-11 | 634 | 719 | 11 | 98 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +s++ l kk a + g+ k+e k ++l+d+s r W v + ++ + + + +GW +F+k n+++ gD++ F+l++++e +++v++ + XP_020677118.1 634 VQSSLQELQKKLACQLGKFKHERKIIVLQDPSLRCWPVLY--HQSNKYIGFIGGWVDFAKGNNICGGDICEFELINKMELKFRVHITK 719 5555566777777677777788899***************..66666677789**********************9999999999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 726 aa Download sequence |
MQASLELSAA TLMKKRGRKP SSRSPPPLNT CPLSFFKVLL GDFKDVLFIP PMAACTLKGL 60 AKKYVYIEDA FGKYWNVKMS MVDGSLAFQN GWCDFVSDHC ITVGEFVLFT YTGGLIFAAR 120 IFGTNALERV NFKVKRRRGI AKERCITELK PGNVRTSKRK KTAQPSEEQH SPFGTEVQRS 180 LKRKQKAVKC DFPKVHVIES DSISEGVLEL SSAGEKPLYD SNSKESENAL LDSEQTWHKN 240 SDATVGELNI KSPSDLANSD LENIEAVSSK SIINRMSTSE NGAAFRDIGG VLPSKQTAEE 300 PDAMTKTSTW AVKGHSDNKE WSAEISGSQV QMNKEDDDIR NNGKTEQGLS HDLEMLDREP 360 PDMKMASLSN LKHAECSPKM EFNLIKPEVI SEIDSGSQVQ MKKEHDAIIN NGKTEQGLSH 420 DLEMLDSESN YMKIASLSNL EHAECSPKME LNLIKPEEIS EMVFLSADAI CHPTLDEKLI 480 ELATGASFNA NELEEPLCGN FHGSFDLETS VPCQNISAVS SNPILNHTID KMENLMIISE 540 EYGVSQTTGS STIAESGLQS CNKVHECKYK SYPEIVKGSD CQSGIADDTF FDEDEKNVTP 600 CSSRRCKVKI DRSESVDIPS SSCVGFSICL SDDVQSSLQE LQKKLACQLG KFKHERKIIV 660 LQDPSLRCWP VLYHQSNKYI GFIGGWVDFA KGNNICGGDI CEFELINKME LKFRVHITKA 720 ERSNLC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 158 | 186 | KRKKTAQPSEEQHSPFGTEVQRSLKRKQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 3e-09 | B3 family protein |