PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020676503.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 239aa MW: 27416.2 Da PI: 10.1012 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.3 | 3e-31 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtfskRrngi+KKA+ELSvLCdae+a+iifss+gkl+e+ XP_020676503.1 9 KRIENKINRQVTFSKRRNGIMKKAYELSVLCDAEIALIIFSSRGKLFEFG 58 79**********************************************95 PP | |||||||
2 | K-box | 100.3 | 2.7e-33 | 81 | 170 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++++ +++qel+kLk+++e+Lqr+qRhllGedL+ LslkeLqqLe+qLe+sl++ R+k+++++l+q+eel+kke+ l ++nk+L++kl XP_020676503.1 81 PNDHETLNWYQELSKLKAKYESLQRSQRHLLGEDLDMLSLKELQQLERQLESSLSHARQKRTQIMLNQMEELKKKERHLGDINKQLKHKL 170 4677889*********************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MGRGRVELKR IENKINRQVT FSKRRNGIMK KAYELSVLCD AEIALIIFSS RGKLFEFGSP 60 DITKTLERYQ RCTFTPQTIH PNDHETLNWY QELSKLKAKY ESLQRSQRHL LGEDLDMLSL 120 KELQQLERQL ESSLSHARQK RTQIMLNQME ELKKKERHLG DINKQLKHKL GADGGSMRPL 180 QGSWRSDAGA SIDAFPNHSS NMDTEPTLQI GRYHQYVPSE ATIPRSSGAG NGFMSGWAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 6e-81 | MIKC_MADS family protein |