PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020676009.2

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

HSF

Protein Properties

Length: 439aa MW: 49761.1 Da PI: 4.7216

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020676009.2	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.8	1.1e-35	14	105	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++l+d+++++++sws++g sf+v+++ +fa+++Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF++++F +g+k+ll++ XP_020676009.2 14 FLTKTYDMLDDPSTNSIVSWSTSGCSFIVWNPLDFARDLLPTYFKHNNFSSFIRQLNTYGFRKIDPER---------WEFANDEFIRGQKHLLKN 99 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_020676009.2 100 IHRRKP 105 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MEGSHGGSSS PAPFLTKTYD MLDDPSTNSI VSWSTSGCSF IVWNPLDFAR DLLPTYFKHN 60 NFSSFIRQLN TYGFRKIDPE RWEFANDEFI RGQKHLLKNI HRRKPVHSHS TPPLGTNFSM 120 PLAESERQDL KDEIGRLEHD KSTLIIELQK HTQNQQGMDL QMKDLEERLQ VMAFRQRNLV 180 SFLDQVIQRP GFLSTLIQQS DIHTKKRRLP KHDYLMDEKN NSFLGLTRER LDGSFTSLLD 240 IEPFEKMESS LNSLETFFQE VGQASGEDAF FEERPPCLTS AVAATDMHAS SGETDIDRHS 300 GPSSSCPEDI NLYPDSPSQA QSPIIPVVDF PSLQTGMKGK VSDIDMNAEP AAHSRDQGIE 360 IPATTMASGV NDTFWEQFLT ENPCYSDAQE SQSEKSDVDD GRRAEETMKE QGSSWWNRKS 420 VDNLTERMGN LSSTERTDS

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MEGSHGGSSS PAPFLTKTYD MLDDPSTNSI VSWSTSGCSF IVWNPLDFAR DLLPTYFKHN  60
NFSSFIRQLN TYGFRKIDPE RWEFANDEFI RGQKHLLKNI HRRKPVHSHS TPPLGTNFSM  120
PLAESERQDL KDEIGRLEHD KSTLIIELQK HTQNQQGMDL QMKDLEERLQ VMAFRQRNLV  180
SFLDQVIQRP GFLSTLIQQS DIHTKKRRLP KHDYLMDEKN NSFLGLTRER LDGSFTSLLD  240
IEPFEKMESS LNSLETFFQE VGQASGEDAF FEERPPCLTS AVAATDMHAS SGETDIDRHS  300
GPSSSCPEDI NLYPDSPSQA QSPIIPVVDF PSLQTGMKGK VSDIDMNAEP AAHSRDQGIE  360
IPATTMASGV NDTFWEQFLT ENPCYSDAQE SQSEKSDVDD GRRAEETMKE QGSSWWNRKS  420
VDNLTERMGN LSSTERTDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	4e-91	HSF family protein