PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020675859.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 164aa MW: 19034.7 Da PI: 10.6152 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.1 | 4.9e-14 | 3 | 48 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+WT+eEd+ l d+vk G+++W++I + + Rt+k+c++rw + XP_020675859.1 3 KGPWTAEEDKVLMDYVKNNGPRDWSSIQSNGLLPRTGKSCRLRWVN 48 79*************************9976667**********87 PP | |||||||
2 | Myb_DNA-binding | 38.9 | 2e-12 | 59 | 99 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++T eE+ +d +++G++ W++Ia + gRt++++k++w XP_020675859.1 59 KFTLEEERAVIDMQARFGNK-WARIATFLE-GRTDNDVKNFWS 99 79******************.*********.***********5 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 164 aa Download sequence |
MKKGPWTAEE DKVLMDYVKN NGPRDWSSIQ SNGLLPRTGK SCRLRWVNKL RPNLKSGCKF 60 TLEEERAVID MQARFGNKWA RIATFLEGRT DNDVKNFWST RQKRLARLLQ TPLPVRSQRR 120 QKSSPVSSQV SDSEDVLLQN LNSPSIQFIK FTENYVNGKE LDYI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G60460.1 | 3e-61 | MYB family protein |