PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020675682.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | bHLH | ||||||||
Protein Properties | Length: 243aa MW: 27329.8 Da PI: 4.7747 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 21.9 | 3.2e-07 | 94 | 138 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h +rEr RR+r+ ++++ L ++lP +K +iLe +v +++L XP_020675682.1 94 HMMRERLRRERLSQSYQDLHSMLPLG-----TKACRNSILESTVMMVREL 138 889*********************96.....4666666888888888777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MDPSSSTSPI FSAEEELSFN GELPLSVFSP DPLFDPLTSA SLSLSDSSSS ALSNYTKPPL 60 KLNSVLQDDD NGGGNIHRSK RELNGEKNGR DFQHMMRERL RRERLSQSYQ DLHSMLPLGT 120 KACRNSILES TVMMVRELKI VEEEMQQRNK ELLSMLKSKP ATERSSEPSD EVEIKIKMPN 180 TTSTVDSVIN ALHCLKGMDV KIRAIRSELS SEGDQELIMT IQSQMCESDE ELETQAMTRR 240 FLP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 99 | 104 | RLRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43650.1 | 7e-13 | bHLH family protein |