PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020674883.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 312aa MW: 35182.4 Da PI: 7.4643 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58 | 2.2e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +v+++G+g+W++++ g+ R+ k+c++rw +yl XP_020674883.1 14 KGPWTPEEDIILVSYVQEHGPGNWRSVPTNTGLSRCSKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50 | 6.7e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E++l++++ ++lG++ W++Ia++++ Rt++++k++w+++l XP_020674883.1 67 RGSFTDQEEKLIIHLQALLGNR-WAAIASYLP-ERTDNDIKNYWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MGRPPCCDKI GVKKGPWTPE EDIILVSYVQ EHGPGNWRSV PTNTGLSRCS KSCRLRWTNY 60 LRPGIKRGSF TDQEEKLIIH LQALLGNRWA AIASYLPERT DNDIKNYWNT HLKKKLIRKL 120 EIDVEIDGES SINKRTAFSN YQPITKGQWE RRLQTDINMA KQALQEALSM EKPSFLYETK 180 PSCSSHSSNN SRPPSSMYAS STENISRLLQ NWIRKPPNPS SDSDRANSAE STQLSVAANS 240 SSSEGKTGSF GDNKRRNIVS PEACSVFQVE SKPTLEPELH FSLLETWLLD ESYAGGNDSN 300 MLDIGLDEHE LF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47600.1 | 1e-103 | MYB family protein |