PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020673909.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | C2H2 | ||||||||
Protein Properties | Length: 199aa MW: 21413.3 Da PI: 7.086 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.3 | 5.8e-05 | 60 | 79 | 2 | 21 |
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C+ Cgk F+++ L H+r XP_020673909.1 60 PCTECGKLFPSWKALFGHMR 79 5******************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MMNSSNPSSP PPADPPVSHP PLPPPNHPQR FPPPKPPAGA TKRRAPKKPE FSGMPEAIPP 60 CTECGKLFPS WKALFGHMRC HPERQWRGII PPPHSPRAQF TDEEHQVASS LVLLANGPPA 120 ETSSGELGGA AIIQPLSSSF DDSIKSKKRK GFRDQFSPSS SSSCFCSEDE CLLDLNLPPP 180 LESAEGGNSP VLELKLGFD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35280.1 | 2e-22 | C2H2 family protein |