PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020673830.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GeBP
Protein Properties Length: 287aa    MW: 31737.8 Da    PI: 6.699
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020673830.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573102.14.6e-3245143297
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 
                     +fq+lw+  De+ +LqG+++f++k+g+   ++++d+  f+e ++ +++f+++k+q+ eK+rrLKkK+++  +k+ sg+ ++f+++hd+ +fe+s+
  XP_020673830.1  45 MFQKLWTHADEMKVLQGFLEFTSKRGTthaNYQHDTGPFFEAIRPRLQFDFNKNQIAEKLRRLKKKYRNAAAKMGSGRGFVFKSPHDRATFEISR 139
                     79************************98867777************************************************************* PP

          DUF573  94 kiWg 97 
                      iW 
  XP_020673830.1 140 NIWS 143
                     ***7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MTSAGEDDPA AGDDEVTDSE EMIGSSDHIQ RQIPNSSGGE ESRRMFQKLW THADEMKVLQ  60
GFLEFTSKRG TTHANYQHDT GPFFEAIRPR LQFDFNKNQI AEKLRRLKKK YRNAAAKMGS  120
GRGFVFKSPH DRATFEISRN IWSSTFYRKP KNRTNQEDRS GDVAGSEEAL VPVTLVSSAS  180
ALPPSPAEEG GSVPPPAKAE AIASAAAAAG PSVEEEAVRI CLAPLFKELV QFAVAGVTAA  240
PPIAVSVEKD ERWRRQRILE LELYLKRMEL VEELVRSSLE KLKSMGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.21e-38GeBP family protein