PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020673450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | GATA | ||||||||
Protein Properties | Length: 205aa MW: 22789.6 Da PI: 8.4939 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 55.2 | 9.4e-18 | 123 | 156 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C++C++ +Tp+WR gp+g+ktLCnaCG++y + + XP_020673450.1 123 CRHCKAEETPQWRLGPEGPKTLCNACGVRYNSGR 156 ******************************9877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MIDLPAAAAR ATAEAEAEAL PDDVLLLDFS SDPNCNLDAP TPQLFQDIFD AAIDDPGSAV 60 DGEEEELEWL ANKDAFPPLE TSFDPVSRLP FRPPSRARSG GRRRRRKALP TFPPSTAPEK 120 KQCRHCKAEE TPQWRLGPEG PKTLCNACGV RYNSGRLVPE YRPANSPTFS AAIHSNSHRR 180 VMEIRRRKYG GRRGRPRVRL VSESS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24050.1 | 2e-34 | GATA family protein |