PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020672420.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 303aa    MW: 34146.6 Da    PI: 6.379
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020672420.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.51.1e-32181238259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers+edp++v++tYeg+H+h+
  XP_020672420.1 181 EDGYRWRKYGQKAVKNSRYPRSYYRCTTQKCLVKKRVERSHEDPSIVITTYEGQHTHH 238
                     8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MSGEKLGELF QHDSTIFDPY SLFSLRSGGP QGLESGLPQF SGFLDYLQSS TDFGFTSSLS  60
QEPFGLIGDR HKVCKAEPRA TENVISSVFA GGGTRAMTAN SSVSSSSTEA AGEEESDKNE  120
KNEEKEQEEE DEENKDVKGV DDGADEDEKA KTVSKSRKKG EKRQRQPRFA FMTKSEVDHL  180
EDGYRWRKYG QKAVKNSRYP RSYYRCTTQK CLVKKRVERS HEDPSIVITT YEGQHTHHYP  240
SNVRGSSHML ANPQSSMPPS FHHDLFLQTL TPPLQQFNLP ANYHELLLLQ NSIHPSFINS  300
NQP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.13e-51WRKY family protein