PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020672239.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | C2H2 | ||||||||
Protein Properties | Length: 177aa MW: 19292.9 Da PI: 5.0274 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.7 | 8.9e-05 | 39 | 61 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C +C++ F++ L H+++H XP_020672239.1 39 YDCVYCKRGFTTAQALGGHMNMH 61 88*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MEEEGEEEKL KAAGDSQAES SEPAADEPGT STGGSARFYD CVYCKRGFTT AQALGGHMNM 60 HRHDRARLRP ARPSPSSPRK SEEAYHPYSR AQRPPPKQSA GEQSSSSSYV VYFPASSSEE 120 GSQRATELAQ AGEELQLGLG GSGSKEEKEK KKELVEEDLD LELRLGHRKS QESNSSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43540.1 | 7e-11 | C2H2 family protein |