PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020671734.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 243aa MW: 28042.5 Da PI: 6.6688 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.5 | 1.5e-18 | 10 | 57 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++lv+ v ++G ++W+ Ia+ g++Rt+k+c++rw++yl XP_020671734.1 10 KGPWTEQEDLQLVCFVSLFGERRWDFIAKVSGLNRTGKSCRLRWFNYL 57 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.9 | 2e-17 | 64 | 108 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 gr+T++E+ l+++++ ++G++ W++Iar+++ gRt++++k++w++++ XP_020671734.1 64 GRMTPQEERLILELHSEWGNR-WSRIARRLP-GRTDNEIKNYWRTHM 108 89*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MVVVSEEIRK GPWTEQEDLQ LVCFVSLFGE RRWDFIAKVS GLNRTGKSCR LRWFNYLQPG 60 LKHGRMTPQE ERLILELHSE WGNRWSRIAR RLPGRTDNEI KNYWRTHMRK KAQERKKNSS 120 SSASTISTCL STHSASPLDA TTTKNEEDGS SLITEKESRE KEYAVNVYPM EQIWNDIASL 180 ESGGSSFAQC TVERCNLSCD PPPMTSPVQE HFVDYLWMMD DNEFSKIATS NDFRFLTSGI 240 IES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59780.3 | 2e-73 | MYB family protein |