PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cz16g17050.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
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Family | C2H2 | ||||||||
Protein Properties | Length: 264aa MW: 27344.1 Da PI: 8.5015 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 23.7 | 1.2e-07 | 110 | 132 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C+k+Fs+ s+L++H+ +H Cz16g17050.t1 110 FPCPECSKVFSNISSLRKHMHMH 132 89******************999 PP | |||||||
2 | zf-C2H2 | 16.3 | 2.9e-05 | 137 | 161 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C Cgk F + L+rH+ tH Cz16g17050.t1 137 HVCDypGCGKAFVDGGKLTRHLLTH 161 689999*****************99 PP | |||||||
3 | zf-C2H2 | 13.7 | 0.00019 | 167 | 190 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ykCp Cgk F n ++H + H Cz16g17050.t1 167 YKCPQCGKAFLMDFNVRSHWKQvH 190 9***************99999777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence |
MPCRVPTKVV VGGPEVSIMK WVAQTPLQNP VPPLHMPTNK GVSQPDVADV GSVAKVQHSS 60 SSANLADVAA SSAVPSHTAS PAATAGTPGY SPAAATLQGP NAATTGAQQF PCPECSKVFS 120 NISSLRKHMH MHGEKLHVCD YPGCGKAFVD GGKLTRHLLT HSTDRNYKCP QCGKAFLMDF 180 NVRSHWKQVH KGLPMPPSLY PDKSTPPPPA VQQQQASPVG PTQLPATGTA AAELLESTPT 240 TQAPSAAAIA AAISTLHNMD GDT* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.2 | 5e-25 | C2H2 family protein |